BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023B02SP1|AL427998
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig902 1573 0.0
>3x_Contig902
Length = 2936
Score = 1573 bits (790), Expect = 0.0
Identities = 867/887 (97%), Gaps = 10/887 (1%)
Strand = Plus / Plus
Query: 1 aacaataaaggawaatgccggtgttttcgttgttaatccatattgaatgtcgaggctgtc 60
|||||||| ||| ||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 440 aacaataacggaaaatgccggtgttttcgttgttaatccaa--tgaatgtcgag-ctgtc 496
Query: 61 gcctcaaaagaaaacttgatgtcgtn-gcattggatttatctaaaataaatccaaatatt 119
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 497 gcctcaaaagaaaacttgatgtcgtcagcattggatttatctaaaataaatccaaatatt 556
Query: 120 gcgtctaagatgggaccaccacaaactactcagcagacgcggttagttggccgtgacgtc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gcgtctaagatgggaccaccacaaactactcagcagacgcggttagttggccgtgacgtc 616
Query: 180 gctttgaacaaaactgttaggatacgttctgcgggatacaaggggcagttgggtattgtc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gctttgaacaaaactgttaggatacgttctgcgggatacaaggggcagttgggtattgtc 676
Query: 240 aaagacgtcaatggagataaggctactattgaattgcactccaaaaataagcatattaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aaagacgtcaatggagataaggctactattgaattgcactccaaaaataagcatattaca 736
Query: 300 atagacaaaagaaaacttacttacttcagtcatgaaggtggtgaaggtataacatacgat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 atagacaaaagaaaacttacttacttcagtcatgaaggtggtgaaggtataacatacgat 796
Query: 360 gaacttgttagtagacgtggtagaactccacataccagattgggcc--caagctatgtca 417
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 797 gaacttgttagtagacgtggtagaactccacataccagattgggcccacacgctatgtca 856
Query: 418 gtgcaccaagacacatggctgccggtggtgcggtggcaacgaacactccgcaacaacttc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 gtgcaccaagacacatggctgccggtggtgcggtggcaacgaacactccgcaacaacttc 916
Query: 478 ctggtggaatgactcctggttggaatgcatttgatggcggtaaaactcctgcggttggcc 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 ctggtggaatgactcctggttggaatgcatttgatggcggtaaaactcctgcggttggcc 976
Query: 538 agaacggaggaacttcatcctggggtggtgcttcgacatgggggcggacaaggccctggt 597
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 977 agaacggaggaacttcatcctggggtggtgcttcgacat-ggggcggacaaggccctggt 1035
Query: 598 ggtgcttctgcctggggtggagctgctggaaacacttccacctggggt-ggcaaggtgct 656
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1036 ggtgcttctgcctggggtggagctgctggaaacacttccacctggggtgggcaaggtgct 1095
Query: 657 acatcaacttggggtggtgcgtccacttggggtaataaatctagttatggaggcgcctct 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1096 acatcaacttggggtggtgcgtccacttggggtaataaatctagttatggaggcgcctct 1155
Query: 717 tcttgggcagcaagcggagaatcaggagcagcttctgcctggggcggtggcaataaatcm 776
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1156 tcttgggcagcaagcggagaatcaggagcagcttctgcctggggcggtggcaataaatca 1215
Query: 777 agctatgggaggtacttctacctggggkggtraccagggrggtgtctctgcctcggggtg 836
|||||| |||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||
Sbjct: 1216 agctat-ggaggtacttctacctggggtggtaaccagggaggtgtctctgcct-ggggtg 1273
Query: 837 gcagtggtaataaatcacaacgrtctaaaaacaccggtggaagttcc 883
|||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1274 gcagtggtaataaatcacaacgatctaaaaacaccggtggaagttcc 1320
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4225
Number of Sequences: 1807
Number of extensions: 4225
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)